Pseudomonas amygdali pv. tabaci ATCC 11528, AAY86_RS06100
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas amygdali pv. tabaci ATCC 11528 - Assembly GCF_001006455.1
GCF_001006455.1|latest |
| Locus Tag |
AAY86_RS06100
|
| Name |
Synonym: AAY86_06090 |
| Replicon | scaffold2.1 |
| Genomic location | 472905 - 475274 (+ strand) |
Cross-References
| RefSeq | WP_005744390.1 |
| GI | 492088983 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ligand-gated channel
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -21.11 |
| Kyte-Doolittle Hydrophobicity Value | -0.360 |
| Molecular Weight (kDa) | 85.7 |
| Isoelectric Point (pI) | 4.67 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001486 (1037 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: AAY86_RS06100
Search term: ligand-gated channel
|
Human Homologs
References
No references are associated with this feature.