Pseudomonas amygdali pv. tabaci ATCC 11528, AAY86_RS03105

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas amygdali pv. tabaci ATCC 11528 - Assembly GCF_001006455.1
GCF_001006455.1|latest
Locus Tag
AAY86_RS03105
Name
Synonym: AAY86_03105
Replicon scaffold1.1
Genomic location 660068 - 661522 (+ strand)

Cross-References

RefSeq WP_016980921.1
GI 515547956

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA helicase
Synonyms
Evidence for Translation
Charge (pH 7) -1.18
Kyte-Doolittle Hydrophobicity Value -0.358
Molecular Weight (kDa) 53.8
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001808 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: AAY86_RS03105
Search term: RNA helicase

Human Homologs

Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 7.7e-66
Percent Identity: 39.2

References

No references are associated with this feature.