Pseudomonas aeruginosa DSM 50071, PA50071_RS06380
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa DSM 50071 - Assembly GCF_001045685.1
GCF_001045685.1|latest |
| Locus Tag |
PA50071_RS06380
|
| Name |
Synonym: PA50071_06380 |
| Replicon | chromosome |
| Genomic location | 1372881 - 1373984 (+ strand) |
Cross-References
| RefSeq | WP_003113855.1 |
| GI | 489204790 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
resistance-nodulation-cell division (RND) efflux membrane fusion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 6.19 |
| Kyte-Doolittle Hydrophobicity Value | -0.238 |
| Molecular Weight (kDa) | 40.1 |
| Isoelectric Point (pI) | 9.81 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AMR gene predictions from CARD database
Identified using the Resistance Gene Identifier (RGI)
| Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
| MexJ | MexJ is the membrane fusion protein of the MexJK multidrug efflux protein. [PMID:12193619] | ARO:3003692 | protein homolog model | Perfect | 697.2 | 100.0 | 3.2.5 |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000154 (998 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA50071_RS06380
|
Human Homologs
References
No references are associated with this feature.