Pseudomonas aeruginosa MRSN 317, T648_RS11695
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa MRSN 317
GCF_000982125.1|latest |
| Locus Tag |
T648_RS11695
|
| Name |
Synonym: T648_11695 |
| Replicon | contig8 |
| Genomic location | 615806 - 618190 (+ strand) |
Cross-References
| RefSeq | WP_046602413.1 |
| GI | 817614868 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
NAD-dependent DNA ligase LigA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -17.07 |
| Kyte-Doolittle Hydrophobicity Value | -0.178 |
| Molecular Weight (kDa) | 86.8 |
| Isoelectric Point (pI) | 5.18 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003829 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: T648_RS11695
Search term: NAD-dependent DNA ligase LigA
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
replication factor C subunit 1 [Source:HGNC Symbol;Acc:HGNC:9969]
E-value:
9.8e-10
Percent Identity:
51.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
replication factor C subunit 1 [Source:HGNC Symbol;Acc:HGNC:9969]
E-value:
9.8e-10
Percent Identity:
51.4
|
|
Ensembl
110, assembly
GRCh38.p14
|
replication factor C subunit 1 [Source:HGNC Symbol;Acc:HGNC:9969]
E-value:
9.8e-10
Percent Identity:
51.4
|
References
No references are associated with this feature.