Pseudomonas aeruginosa NCGM1900, NCGM1900_RS28285
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa NCGM1900
GCF_000829275.1|latest |
| Locus Tag |
NCGM1900_RS28285
|
| Name |
Synonym: NCGM1900_5725 |
| Replicon | chromosome |
| Genomic location | 6042195 - 6043805 (- strand) |
Cross-References
| RefSeq | WP_014603515.1 |
| GI | 504416413 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
decarboxylase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.52 |
| Kyte-Doolittle Hydrophobicity Value | 0.116 |
| Molecular Weight (kDa) | 56.5 |
| Isoelectric Point (pI) | 6.30 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004591 (364 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: NCGM1900_RS28285
Search term: decarboxylase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
2-hydroxyacyl-CoA lyase 1 [Source:HGNC Symbol;Acc:HGNC:17856]
E-value:
1.9e-20
Percent Identity:
23.5
|
References
No references are associated with this feature.