Pseudomonas oryzihabitans NBRC 102199, POR01S_RS01625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas oryzihabitans NBRC 102199
GCF_000730625.1|latest |
| Locus Tag |
POR01S_RS01625
|
| Name |
|
| Replicon | contig_2 |
| Genomic location | 21992 - 23644 (+ strand) |
Cross-References
| RefSeq | WP_042133330.1 |
| GI | 754769193 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ABC transporter ATP-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 4.83 |
| Kyte-Doolittle Hydrophobicity Value | 0.007 |
| Molecular Weight (kDa) | 59.9 |
| Isoelectric Point (pI) | 8.51 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003590 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: POR01S_RS01625
Search term: ABC transporter ATP-binding protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value:
3.9e-21
Percent Identity:
33.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value:
3.9e-21
Percent Identity:
33.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value:
3.9e-21
Percent Identity:
33.2
|
References
No references are associated with this feature.