Pseudomonas sp. M1, PM1_RS04825
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. M1 - Assembly GCF_000317185.3
GCF_000317185.3|latest |
| Locus Tag |
PM1_RS04825
|
| Name |
Synonym: PM1_0204900 |
| Replicon | PM1contig_002 |
| Genomic location | 893922 - 895082 (+ strand) |
Cross-References
| RefSeq | WP_009617298.1 |
| GI | 497303081 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
D-ala-D-ala-carboxypeptidase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.10 |
| Kyte-Doolittle Hydrophobicity Value | -0.074 |
| Molecular Weight (kDa) | 42.3 |
| Isoelectric Point (pI) | 6.97 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4K91 | HYDROLASE | 04/19/13 | Crystal structure of Penicillin-Binding Protein 5 (PBP5) from Pseudomonas aeruginosa in apo state | Pseudomonas aeruginosa UCBPP-PA14 | 2.05 | X-RAY DIFFRACTION | 90.1 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001684 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PM1_RS04825
Search term: D-ala-D-ala-carboxypeptidase
|
Human Homologs
References
No references are associated with this feature.