Pseudomonas sp. M1, PM1_RS04150
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. M1 - Assembly GCF_000317185.3
GCF_000317185.3|latest |
| Locus Tag |
PM1_RS04150
|
| Name |
Synonym: PM1_0204220 |
| Replicon | PM1contig_002 |
| Genomic location | 717685 - 718005 (+ strand) |
Cross-References
| RefSeq | WP_009613305.1 |
| GI | 497299088 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
Fis family transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -1.08 |
| Kyte-Doolittle Hydrophobicity Value | -0.448 |
| Molecular Weight (kDa) | 11.9 |
| Isoelectric Point (pI) | 6.51 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 6M10 | DNA BINDING PROTEIN | 02/24/20 | Crystal structure of PA4853 (Fis) from Pseudomonas aeruginosa | Pseudomonas aeruginosa PAO1 | 2.985 | X-RAY DIFFRACTION | 94.1 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004482 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PM1_RS04150
Search term: Fis family transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.