Pseudomonas chlororaphis PA23, EY04_RS29495
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas chlororaphis PA23
GCF_000698865.1|latest |
| Locus Tag |
EY04_RS29495
|
| Name |
Synonym: EY04_30125 |
| Replicon | chromosome |
| Genomic location | 6598309 - 6599784 (+ strand) |
Cross-References
| RefSeq | WP_009051592.1 |
| GI | 496342414 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -14.39 |
| Kyte-Doolittle Hydrophobicity Value | -0.441 |
| Molecular Weight (kDa) | 55.7 |
| Isoelectric Point (pI) | 5.04 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000083 (1225 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: EY04_RS29495
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.