Pseudomonas aeruginosa VRFPA04, P797_RS18305

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa VRFPA04 - Assembly GCF_000473745.2
GCF_000473745.2|latest
Locus Tag
P797_RS18305
Name
Synonym: P797_18805
Replicon chromosome
Genomic location 4034672 - 4036171 (- strand)

Cross-References

RefSeq WP_003120075.1
GI 489211271

Product

Feature Type CDS
Coding Frame 1
Product Name
RND transporter
Synonyms
Evidence for Translation
Charge (pH 7) -7.05
Kyte-Doolittle Hydrophobicity Value -0.261
Molecular Weight (kDa) 54.0
Isoelectric Point (pI) 5.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
OpmB OpmB is an outer membrane efflux protein in Pseudomonas aeruginosa that shows functional cooperation with MuxABC, to form the efflux pump system MuxABC-OpmB. [PMID:12445646] ARO:3004072 protein homolog model Strict 929.1 98.8 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003040 (534 members)
Putative Inparalogs 1 predicted inparalogs
multidrug transporter (P797_RS04885) 33.3% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: P797_RS18305
Search term: RND transporter

Human Homologs

References

No references are associated with this feature.