Pseudomonas putida S12, RPPX_RS24855
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida S12 - Assembly GCF_000495455.2
GCF_000495455.2|latest |
| Locus Tag |
RPPX_RS24855
|
| Name |
Synonym: RPPX_24855 |
| Replicon | chromosome |
| Genomic location | 5582687 - 5583190 (+ strand) |
Cross-References
| RefSeq | WP_014591436.1 |
| GI | 504404334 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.04 |
| Kyte-Doolittle Hydrophobicity Value | -0.435 |
| Molecular Weight (kDa) | 18.6 |
| Isoelectric Point (pI) | 5.68 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000082 (1224 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: RPPX_RS24855
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.