Pseudomonas putida S12, RPPX_RS20485
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida S12 - Assembly GCF_000495455.2
GCF_000495455.2|latest |
| Locus Tag |
RPPX_RS20485
|
| Name |
Synonym: RPPX_20485 |
| Replicon | chromosome |
| Genomic location | 4593033 - 4593545 (+ strand) |
Cross-References
| RefSeq | WP_012052087.1 |
| GI | 500998666 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
RNA polymerase sigma factor
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.11 |
| Kyte-Doolittle Hydrophobicity Value | -0.348 |
| Molecular Weight (kDa) | 19.5 |
| Isoelectric Point (pI) | 6.95 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000463 (1798 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: RPPX_RS20485
Search term: RNA polymerase sigma factor
|
Human Homologs
References
No references are associated with this feature.