Pseudomonas putida S12, RPPX_RS09120

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S12 - Assembly GCF_000495455.2
GCF_000495455.2|latest
Locus Tag
RPPX_RS09120
Name
Synonym: RPPX_09120
Replicon chromosome
Genomic location 2034176 - 2035060 (- strand)

Cross-References

RefSeq WP_019438063.1
GI 518267855

Product

Feature Type CDS
Coding Frame 1
Product Name
MBL fold metallo-hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) -9.26
Kyte-Doolittle Hydrophobicity Value -0.180
Molecular Weight (kDa) 32.7
Isoelectric Point (pI) 5.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4YSK HYDROLASE 03/17/15 Crystal structure of apo-form SdoA from Pseudomonas putida Pseudomonas putida (strain F1 / ATCC 700007) 2.466 X-RAY DIFFRACTION 99.0
4YSL HYDROLASE 03/17/15 Crystal structure of SdoA from Pseudomonas putida in complex with glutathione Pseudomonas putida (strain F1 / ATCC 700007) 1.4618 X-RAY DIFFRACTION 99.0

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000801 (986 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: RPPX_RS09120

Human Homologs

Ensembl 110, assembly GRCh38.p14
ETHE1 persulfide dioxygenase [Source:HGNC Symbol;Acc:HGNC:23287]
E-value: 4.6e-21
Percent Identity: 29.2

References

No references are associated with this feature.