Pseudomonas putida S12, RPPX_RS08280
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida S12 - Assembly GCF_000495455.2
GCF_000495455.2|latest |
| Locus Tag |
RPPX_RS08280
|
| Name |
Synonym: RPPX_08280 |
| Replicon | chromosome |
| Genomic location | 1856550 - 1857827 (- strand) |
Cross-References
| RefSeq | WP_003255866.1 |
| GI | 489348761 |
| EC Number | 2.6.1.19 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
5-aminovalerate aminotransferase DavT
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -4.27 |
| Kyte-Doolittle Hydrophobicity Value | 0.228 |
| Molecular Weight (kDa) | 44.8 |
| Isoelectric Point (pI) | 6.12 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000263 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: RPPX_RS08280
Search term: 5-aminovalerate aminotransferase DavT
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value:
2.9e-40
Percent Identity:
29.8
|
References
No references are associated with this feature.