Pseudomonas putida NBRC 14164, PP4_08860 (bifA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida NBRC 14164 - Assembly GCF_000412675.1
GCF_000412675.1|latest |
| Locus Tag |
PP4_08860
|
| Name |
bifA
|
| Replicon | chromosome |
| Genomic location | 1023640 - 1025694 (- strand) |
Cross-References
| RefSeq | YP_008111923.1 |
| GI | 512683943 |
| Entrez | 16138248 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
cyclic-di-GMP phosphodiesterase BifA
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -13.51 |
| Kyte-Doolittle Hydrophobicity Value | -0.257 |
| Molecular Weight (kDa) | 77547.8 |
| Isoelectric Point (pI) | 5.72 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 450 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003960 (524 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PP4_08860
Search term: bifA
Search term: cyclic-di-GMP phosphodiesterase BifA
|
Human Homologs
References
No references are associated with this feature.