Pseudomonas putida NBRC 14164, PP4_03500 (soxB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida NBRC 14164 - Assembly GCF_000412675.1
GCF_000412675.1|latest
Locus Tag
PP4_03500
Name
soxB
Replicon chromosome
Genomic location 407281 - 408531 (+ strand)

Cross-References

RefSeq YP_008111387.1
GI 512683407
Entrez 16138124
INSDC BAN52203.1
UniParc UPI0002F8D951
UniProtKB Acc T2H1B6
UniProtKB ID T2H1B6_PSEPU
UniRef100 UniRef100_T2H1B6
UniRef50 UniRef50_O87388
UniRef90 UniRef90_Q9HTE8

Product

Feature Type CDS
Coding Frame 1
Product Name
sarcosine oxidase beta subunit
Synonyms
Evidence for Translation
Charge (pH 7) 7.48
Kyte-Doolittle Hydrophobicity Value -0.178
Molecular Weight (kDa) 45.2
Isoelectric Point (pI) 8.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 287 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004970 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PP4_03500
Search term: soxB

Human Homologs

References

No references are associated with this feature.