Pseudomonas denitrificans ATCC 13867, H681_00295
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest |
| Locus Tag |
H681_00295
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 70382 - 71692 (- strand) |
Cross-References
| RefSeq | YP_007655481.1 |
| GI | 472323235 |
| Entrez | 14994199 |
| NCBI Locus Tag | H681_00295 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
16S rRNA methyltransferase B
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 3.91 |
| Kyte-Doolittle Hydrophobicity Value | -0.237 |
| Molecular Weight (kDa) | 47815.3 |
| Isoelectric Point (pI) | 7.97 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 581 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000017 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H681_00295
Search term: 16S rRNA methyltransferase B
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
3.5e-25
Percent Identity:
29.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
3.5e-25
Percent Identity:
29.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
3.5e-25
Percent Identity:
29.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
3.5e-25
Percent Identity:
29.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
3.5e-25
Percent Identity:
29.3
|
|
Ensembl
110, assembly
GRCh38.p14
|
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value:
3.5e-25
Percent Identity:
29.3
|
References
No references are associated with this feature.