Pseudomonas poae RE_1-1-14, H045_03275

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_03275
Name
Replicon chromosome
Genomic location 714471 - 715367 (- strand)

Cross-References

RefSeq YP_007396227.1
GI 447915659
Entrez 14502459
INSDC AGE24731.1
NCBI Locus Tag H045_03275
UniParc UPI0002AF4809
UniProtKB Acc M4JXD8
UniProtKB ID M4JXD8_9PSED
UniRef100 UniRef100_M4JXD8
UniRef50 UniRef50_A9L4A5
UniRef90 UniRef90_G8QC20

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 5.71
Kyte-Doolittle Hydrophobicity Value -0.303
Molecular Weight (kDa) 33713.2
Isoelectric Point (pI) 8.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 483 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002044 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_03275

Human Homologs

References

No references are associated with this feature.