Pseudomonas protegens Pf-5, PFL_6134

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6134
Name
Replicon chromosome
Genomic location 6964497 - 6965351 (+ strand)

Cross-References

RefSeq YP_263192.1
GI 70733417
Entrez 3480504
INSDC AAY95322.1
NCBI Locus Tag PFL_6134
UniParc UPI000054E2AC
UniProtKB Acc Q4K3J1
UniProtKB ID Q4K3J1_PSEF5
UniRef100 UniRef100_Q4K3J1
UniRef50 UniRef50_Q4K3J1
UniRef90 UniRef90_Q4K3J1

Product

Feature Type CDS
Coding Frame 1
Product Name
metallo-beta-lactamase domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.09
Kyte-Doolittle Hydrophobicity Value -0.024
Molecular Weight (kDa) 31.2
Isoelectric Point (pI) 6.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 102 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001507 (674 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6134

Human Homologs

References

No references are associated with this feature.