Pseudomonas protegens Pf-5, PFL_6134
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00849 | Lactamase_B_5a | IPR001279 | Metallo-beta-lactamase | 34 | 272 | 3.8E-11 |
| Gene3D | G3DSA:3.60.15.10 | - | IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 4 | 284 | 3.0E-55 |
| CDD | cd07730 | metallo-hydrolase-like_MBL-fold | - | - | 13 | 273 | 7.43958E-86 |
| SUPERFAMILY | SSF56281 | Metallo-hydrolase/oxidoreductase | IPR036866 | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 30 | 277 | 1.26E-32 |
| Pfam | PF00753 | Metallo-beta-lactamase superfamily | IPR001279 | Metallo-beta-lactamase | 34 | 204 | 1.0E-14 |
| PANTHER | PTHR42978 | QUORUM-QUENCHING LACTONASE YTNP-RELATED-RELATED | - | - | 4 | 282 | 1.9E-42 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.