Pseudomonas protegens Pf-5, PFL_5760 (gbdR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5760
Name
gbdR
Replicon chromosome
Genomic location 6559128 - 6560231 (- strand)

Cross-References

RefSeq YP_262818.1
GI 70733045
Entrez 3480132
INSDC AAY94950.1
NCBI Locus Tag PFL_5760
UniParc UPI000054E13B
UniProtKB Acc Q4K4L5
UniProtKB ID Q4K4L5_PSEF5
UniRef100 UniRef100_Q4K4L5
UniRef50 UniRef50_Q4K4L5
UniRef90 UniRef90_Q4K4L5

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator GbdR
Synonyms
Evidence for Translation
Charge (pH 7) 5.92
Kyte-Doolittle Hydrophobicity Value -0.120
Molecular Weight (kDa) 41.0
Isoelectric Point (pI) 8.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 429 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001883 (1422 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5760
Search term: gbdR

Human Homologs

References

No references are associated with this feature.