Pseudomonas protegens Pf-5, PFL_5449

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5449
Name
Replicon chromosome
Genomic location 6219451 - 6220449 (- strand)

Cross-References

RefSeq YP_262517.1
GI 70732754
Entrez 3479841
INSDC AAY94659.1
NCBI Locus Tag PFL_5449
UniParc UPI000054E01C
UniProtKB Acc Q4K5G6
UniProtKB ID Q4K5G6_PSEF5
UniRef100 UniRef100_Q4K5G6
UniRef50 UniRef50_Q9X6V6
UniRef90 UniRef90_Q4K5G6

Product

Feature Type CDS
Coding Frame 1
Product Name
RlpA family lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) 12.40
Kyte-Doolittle Hydrophobicity Value -0.253
Molecular Weight (kDa) 35.8
Isoelectric Point (pI) 10.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 348 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001683 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5449

Human Homologs

References

No references are associated with this feature.