Pseudomonas protegens Pf-5, PFL_5426 (ladS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5426
Name
ladS
Replicon chromosome
Genomic location 6195162 - 6197528 (- strand)

Cross-References

RefSeq YP_262494.1
GI 70732731
Entrez 3479818
INSDC AAY94636.1
NCBI Locus Tag PFL_5426
UniParc UPI000054E005
UniProtKB Acc Q4K5I9
UniProtKB ID Q4K5I9_PSEF5
UniRef100 UniRef100_Q4K5I9
UniRef50 UniRef50_W0YUZ0
UniRef90 UniRef90_Q4K5I9

Product

Feature Type CDS
Coding Frame 1
Product Name
sensor histidine kinase/response regulator
Synonyms
Evidence for Translation
Charge (pH 7) -9.85
Kyte-Doolittle Hydrophobicity Value 0.210
Molecular Weight (kDa) 86.5
Isoelectric Point (pI) 5.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 613 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002178 (1344 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5426
Search term: ladS

Human Homologs

References

No references are associated with this feature.