Pseudomonas protegens Pf-5, PFL_5426 (ladS)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0000160	phosphorelay signal transduction system	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00448	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016772	transferase activity, transferring phosphorus-containing groups	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0000155	phosphorelay sensor kinase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00512	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0016310	phosphorylation	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00344	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0007165	signal transduction	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00512	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pfl02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
CDD	cd17546	REC_hyHK_CKI1_RcsC-like	-	-	666	773	6.10357E-16
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	605	623	1.5E-10
Pfam	PF07695	7TM diverse intracellular signalling	IPR011623	7TM-DISM receptor, extracellular domain, type 1	183	385	3.9E-55
Pfam	PF07696	7TMR-DISM extracellular 2	IPR011622	7TM-DISM receptor, extracellular domain, type 2	32	170	1.2E-38
SMART	SM00448	REC_2	IPR001789	Signal transduction response regulator, receiver domain	664	773	0.0026
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	629	642	1.5E-10
SUPERFAMILY	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	471	641	9.69E-33
PANTHER	PTHR45339	HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J	-	-	362	777	6.6E-85
Gene3D	G3DSA:2.60.40.2380	-	-	-	29	178	1.2E-40
Pfam	PF00512	His Kinase A (phospho-acceptor) domain	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	418	482	6.2E-14
Gene3D	G3DSA:3.30.565.10	-	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	481	648	4.5E-38
SUPERFAMILY	SSF47384	Homodimeric domain of signal transducing histidine kinase	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	404	483	4.32E-17
CDD	cd16922	HATPase_EvgS-ArcB-TorS-like	-	-	541	637	2.39053E-40
SMART	SM00388	HisKA_10	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	417	482	1.3E-17
FunFam	G3DSA:3.30.565.10:FF:000010	Sensor histidine kinase RcsC	-	-	481	647	1.7E-42
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	588	598	1.5E-10
Gene3D	G3DSA:1.10.287.130	-	-	-	382	480	3.6E-20
Pfam	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	IPR003594	Histidine kinase/HSP90-like ATPase	530	642	9.1E-20
CDD	cd00082	HisKA	IPR003661	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain	415	477	1.57509E-13
SMART	SM00387	HKATPase_4	IPR003594	Histidine kinase/HSP90-like ATPase	529	645	3.2E-23
PRINTS	PR00344	Bacterial sensor protein C-terminal signature	IPR004358	Signal transduction histidine kinase-related protein, C-terminal	570	584	1.5E-10
Gene3D	G3DSA:3.40.50.2300	-	-	-	664	785	9.6E-14
SUPERFAMILY	SSF52172	CheY-like	IPR011006	CheY-like superfamily	662	777	1.27E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.