Pseudomonas protegens Pf-5, PFL_4895

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_4895
Name
Replicon	chromosome
Genomic location	5637965 - 5639311 (- strand)

Cross-References

RefSeq	YP_261976.1
GI	70732220
Entrez	3479306
INSDC	AAY94125.1
NCBI Locus Tag	PFL_4895
UniParc	UPI000054DE03
UniProtKB Acc	Q4K707
UniProtKB ID	Q4K707_PSEF5
UniRef100	UniRef100_Q4K707
UniRef50	UniRef50_Q4K707
UniRef90	UniRef90_Q4K707

Product

Feature Type	CDS
Coding Frame	1
Product Name	response regulator/HD domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-5.71
Kyte-Doolittle Hydrophobicity Value	-0.189
Molecular Weight (kDa)	50408.4
Isoelectric Point (pI)	6.28

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
3HV2	SIGNALING PROTEIN	06/15/09	Crystal structure of signal receiver domain OF HD domain-containing protein FROM Pseudomonas fluorescens Pf-5	Pseudomonas fluorescens Pf-5	1.5	X-RAY DIFFRACTION	99.2

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 473 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG002973 (763 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_4895 Search term: response regulator/HD domain-containing protein

Human Homologs

References