Pseudomonas protegens Pf-5, PFL_4895
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0000160 | phosphorelay signal transduction system |
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF00072 | Response regulator receiver domain | IPR001789 | Signal transduction response regulator, receiver domain | 15 | 125 | 9.2E-18 |
| Pfam | PF13487 | HD domain | - | - | 262 | 320 | 2.2E-16 |
| CDD | cd17569 | REC_HupR-like | - | - | 13 | 130 | 8.74447E-53 |
| SMART | SM00448 | REC_2 | IPR001789 | Signal transduction response regulator, receiver domain | 13 | 125 | 2.7E-17 |
| Gene3D | G3DSA:1.10.3210.10 | Hypothetical protein af1432 | - | - | 180 | 373 | 9.1E-34 |
| SUPERFAMILY | SSF109604 | HD-domain/PDEase-like | - | - | 215 | 375 | 2.89E-13 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 1 | 151 | 3.2E-33 |
| CDD | cd00077 | HDc | IPR003607 | HD/PDEase domain | 215 | 323 | 3.52678E-8 |
| Coils | Coil | Coil | - | - | 138 | 162 | - |
| SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 12 | 174 | 1.42E-30 |
| PANTHER | PTHR45228 | CYCLIC DI-GMP PHOSPHODIESTERASE TM_0186-RELATED | - | - | 12 | 370 | 7.0E-61 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.