Pseudomonas protegens Pf-5, PFL_4758 (tolB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4758
Name
tolB
Replicon chromosome
Genomic location 5496537 - 5497838 (- strand)

Cross-References

RefSeq YP_261839.1
GI 70732083
Entrez 3479169
INSDC AAY93988.1
NCBI Locus Tag PFL_4758
UniParc UPI000054DD7B
UniProtKB Acc Q4K7E4
UniProtKB ID TOLB_PSEF5
UniRef100 UniRef100_Q4K7E4
UniRef50 UniRef50_Q4K7E4
UniRef90 UniRef90_Q4K7E4

Product

Feature Type CDS
Coding Frame 1
Product Name
translocation protein TolB
Synonyms
Evidence for Translation
Charge (pH 7) 7.66
Kyte-Doolittle Hydrophobicity Value -0.254
Molecular Weight (kDa) 47.5
Isoelectric Point (pI) 9.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 370 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000937 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4758
Search term: tolB

Human Homologs

References

No references are associated with this feature.