Pseudomonas protegens Pf-5, PFL_4758 (tolB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas protegens Pf-5 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GAAGACGCGAAGAAAAAAGCTGAAGCAGACGAAGCGAAGAAAAAGATCGCCGAGGATGCCAAGAAGAAAGCTGCGGCCGACGCTGCGAAGAAGAAGGCCC AGGAAGCAGCGCGCAAATCTGCCGAAGAGAAAAAGGCCCAGGCCCTGGCGGACTTGCTGTCCGATAAGCCGGAGCGTGAAGCCACCAAGTCGGATGAGGT GGGTGACAGTGTCGCAGGCAGTTTCGATGACCTGATTCGCATTCGTGCGGCGGAAGGCTGGGCTCGTCCTCCTTCGGCGCGCAAGGGAATGACGGTGGAA CTGCGGATCGGCATGTTGCCTGATGGCACGGTGACCACGGTCAGCGTGATCAAGTCCAGTGGTGATGGTCCGTTCGACGCTTCGGCGGTGGCGGCAGTCA AGAACATTGGGCGTTTGACAGAAATGCAGGGTTTGAGTCCGAAGGATTTCGCGCCCTATCGTTCATTCAAGATGACATTCACACCTGAGGATCTAGCCTT
DNA Sequence for Gene
>PFL_4758 |tolB
GTGAGAAACCTTCTTCGAGGAATGCTTGTCGTTATTTGCTGTATGGCAGGGATAGCGGCAGCGGATGAAAAAAACATTCTGGTCACCAGTGGCAGTGATC GGGCGACGCCGATTGCGGTAGTGCCGTTTGGCTGGCAGGGCGGCAGCGTGCTGCCGGACGACATGGCACAGATCATCGGTGATGACCTGCGCAACTCGGG TTACTACGCACCGATTCCAAAGCAGAACATGATCAGCTTGCCGACCCAGGCCAGCGAAGTCATTTTCCGCGACTGGAAAGCCCTGGGCGCCCAGTACGTG ATGGTCGGCAGCATTGTTCCAGCCGGCGGTCGCCTGCAGGTGCAGTACGCGCTGTTCAACGTCGCGACCGAGCAGCAAGTGCTGACCGGCAGCGTGTCGG GCAGCGTTGATCAACTGCGGGACATGTCGCACTACATTTCCGACCAGTCCTTTGAAAAACTCACCGGCATCAAGGGGGCGTTCTCTACGCGCCTGCTGTA TGTGACGGCTGAGCGTTTCTCGGTGAACAACACCCGTTACACCCTGCAGCGTTCGGACTACGACGGTGCTCGGGCGGTAACCCTGTTGCAGTCTCGCGAG CCGATCCTGTCGCCGCGCTTTGCTCCGGATGGCAAGCGCATTGCGTACGTGTCGTTCGAGCAGAAGCGCCCGCGCATCTTCGTCCAGCACATCGATACCG GGCGTCGTGAGCAGATCACCAACTTCGAAGGCCTGAACGGCGCTCCAGCCTGGTCGCCAGATGGCACCCGCCTGGCGTTCGTGCTGTCCAAGGACGGCAA CCCGGATATCTATGTGATGAACATGGCGTCCCGGCAGATCAGCCGCGTCACCAGTGGCCCGGGCATCAACACCGAACCGTTCTGGGGCAAGGATGGTTCC ACCATCTATTTCACCTCCGACCGTGGCGGCAAGCCGCAAGTCTATAAAAGCAATATCAATGGCGGTGGCGCCGAGCGTGTGACCTTTATTGGTAACTACA ACGCCAACCCGAAACTTTCTGCTGACGAAAAGACCCTGGTAATGATTCACCGCCAGGATGGTTTCACCAACTTCCGGGTAGCGGCTCAGGATTTGCAGCG CGGTAGCGTAAAAATCCTTACAGACACTAACCTTGATGAGTCAGCTACTGTTGCGCCCAACGGCACCATGGTAATCTACGCCACCCGCCAGCAGGGCCGG GGAGTCTTGATGCTCGTGTCCATTAATGGACGTGTGAGGCTCCCGCTTCCTACCGCTCAAGGCGAAGTCAGAGAACCGTCCTGGTCCCCTTACCTGAACT GA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGCGGCGCTACAATGTTTCACTTAACACACTGGGGTTCATTAGGAGTTTCACGATGGAAATGTTGAAGTTTGGTAAGTTTGCTGCGCTGGCTCTGGCCAT GGCTGTGGCTGTAGGTTGCTCCTCCAAAGGCGGCGACAATGCCGGTGAAGGCGCTGTTGATCCAAACGCTGGTTACGGCGCTAACACCGGTGCTGTTGAT GGCTCCCTGAGCGAAGAAGCTGCTCTGCGCGCAATCACCACCTTCTACTTCGAATACGACAGCTCGGACCTGAAGCCAGAAGCCATGCGCGCTCTGGACG TTCACGCCAAAGACCTGAAAGCAAACGGCGCTCGCGTTGTTCTGGAAGGCAACACCGACGAACGTGGTACTCGTGAGTACAACATGGCTCTGGGCGAGCG TCGTGCTAAAGCCGTTCAGCGCTACCTGGTTCTGCAGGGCGTTTCCCCTGCACAGCTGGAGCTGGTTTCCTACGGTAAAGAGCGTCCAGTTGCTACTGGC
Amino Acid Sequence
>translocation protein TolB
MRNLLRGMLVVICCMAGIAAADEKNILVTSGSDRATPIAVVPFGWQGGSVLPDDMAQIIGDDLRNSGYYAPIPKQNMISLPTQASEVIFRDWKALGAQYV MVGSIVPAGGRLQVQYALFNVATEQQVLTGSVSGSVDQLRDMSHYISDQSFEKLTGIKGAFSTRLLYVTAERFSVNNTRYTLQRSDYDGARAVTLLQSRE PILSPRFAPDGKRIAYVSFEQKRPRIFVQHIDTGRREQITNFEGLNGAPAWSPDGTRLAFVLSKDGNPDIYVMNMASRQISRVTSGPGINTEPFWGKDGS TIYFTSDRGGKPQVYKSNINGGGAERVTFIGNYNANPKLSADEKTLVMIHRQDGFTNFRVAAQDLQRGSVKILTDTNLDESATVAPNGTMVIYATRQQGR GVLMLVSINGRVRLPLPTAQGEVREPSWSPYLN
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site