Pseudomonas protegens Pf-5, PFL_4422 (cobS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4422
Name
cobS
Replicon chromosome
Genomic location 5132276 - 5133007 (- strand)

Cross-References

RefSeq YP_261510.1
GI 70731768
EC Number 2.7.8.26
Entrez 3478541
INSDC AAY93673.1
NCBI Locus Tag PFL_4422
UniParc UPI000054DC34
UniProtKB Acc Q4K8C3
UniProtKB ID COBS_PSEF5
UniRef100 UniRef100_Q4K8C3
UniRef50 UniRef50_A4XT57
UniRef90 UniRef90_Q4K8C3

Product

Feature Type CDS
Coding Frame 1
Product Name
cobalamin synthase
Synonyms
Evidence for Translation
Charge (pH 7) 2.65
Kyte-Doolittle Hydrophobicity Value 0.996
Molecular Weight (kDa) 25.9
Isoelectric Point (pI) 8.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 338 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001228 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4422
Search term: cobS

Human Homologs

References

No references are associated with this feature.