Pseudomonas protegens Pf-5, PFL_4422 (cobS)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas protegens Pf-5 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GTTGACTGCAACGGGCTGGCAACAGATGCGCGAAGCCGTCCAGGGGCGGGGCCCCTGGGACCGGGTACTGAGTTCGCCATTGCAGCGCTGTGCGCGTTTT GCCCAAGAGCTGGCGGGGCAGTTGCAGTTGCCGCTGAGCCTTGAGCCCGACCTTCAGGAACTGTACTTTGGCGCCTGGGAAGGGCAGAGCGCGGCGGCGC TGATGGAAACCGACGCCGATGACCTGGGGCGTTTCTGGGCCGATCCCTATGCATTCACCCCGCCTGGGGGCGAGCCGGTAGAGCTGTTCTCCCTGCGGGT GCTGGGGGCGATAGAGCGCTTGTACCAGGCCTGCGCCGGGCAGCGTGTGCTGCTGGTCAGCCATGGCGGGGTCATGCGCCTGCTGCTGGCCCGGGCTCGA GGGCTGCCGCGCCAGCAGTTGTTGAACGTTGAAGTGGGTCATGGCGCGCTGTTTCGTCTGCAGGTCGCCAGCGAAGGCCGGATGAGCGAGGAGGGCTGAG
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| DNA Sequence for Gene |
>PFL_4422
|cobS
ATGTTGCCGTTCTGGATTGCCTTGCAGTTTCTCAGCAGTCTGCCGGTCCGCCTGCCGGGCATGCCTCGGCCTGAAGAGCTGGGCCGCTCGCTGTTGTTCT ATCCGTTGGTGGGGCTGCTGTTCGGCGTGCTGTTGTGGGTGCTGAATGCCATGCTGGGCGGTGTTCCCCTGTTGCTGCATGCGGCCTTGCTGTTGACCGC CTGGGTTCTGCTCAGCGGTGGTCTGCACCTGGATGGCCTGGCGGACAGTGCCGATGCCTGGCTGGGAGGCTTTGGCGATCGAGAGCGGACCCTGAGCATC ATGAAGGACCCCCGTAGTGGTCCGATCGCCGTGGTGACCCTGGTGCTGGTGCTGCTGCTCAAGTTCACCGCCCTGGTGGCGCTGATCGAACAGCAGCAGG GCTTTGCATTGTTGCTGGCGCCGCTGATCGGCCGCGGGGCATTGCTGGGCCTGTTTCTCTGCACGCCTTATGTGCGTGCCGGTGGGCTGGGGCAGGCGCT GGCTGACCACCTGCCACGTGTGGCCGGGCGGCAAGTGCTGGGCTTGAGCGTACTGGCCTGTTTGCTGCTGGGGGGCTACAGCGGGTTATGGGCAGTGCTG CTGGCCACTGTGCTGTTCTTCTGGCTGCGGCAAGTGATGATGCGGCGCCTGGGTGGTACCACTGGAGACACTGCCGGGGCTGTGCTTGAACTGTTGGAAA CTGCCGTATTGCTCGGGGTGGCGCTGTTTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGGAGCACGGGATTGACGATTTTCATGAAAAATCTTGCCTTGGAATAATCACGGGTATATACACGCATCATGCTTCCCTCTCAGTGTTTGTGCACCAAC CTGCGTCGCGCCGCCCGTGGCGTCAGCAGGTACTACGACGGCGCCCTTGATGGCTTCGGGATCAACGTTGCCCAGTATTCTCTGCTGAACAACCTGTTGC GCCTTGATCAGCCAAGCATTTCCAGCCTGGCGGAAGCCATGGGGCTGGATCGCAGCACGCTCGGGCGCAATGTGCGGGTCTTGGAAGCTGCAGGGCTGGT GTGCCTGCAGGAAGGCGACGATCAGCGAAACCGGCTGGTGCTGTTGACCGAGGCCGGGCATGAGCGGCTGGTGGCGGCCTTGCCTGCGTGGGAAGCGGCT CAGCAGCGGTTGATCGATCGCCTGGGTGTGGAAAAGCGTGAAACCTTGTTGGCCTTGCTGAACGAACTGTCTTGAGCGCCTTTCGTTCGACTATAAGCGG
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| Amino Acid Sequence |
>cobalamin synthase
MLPFWIALQFLSSLPVRLPGMPRPEELGRSLLFYPLVGLLFGVLLWVLNAMLGGVPLLLHAALLLTAWVLLSGGLHLDGLADSADAWLGGFGDRERTLSI MKDPRSGPIAVVTLVLVLLLKFTALVALIEQQQGFALLLAPLIGRGALLGLFLCTPYVRAGGLGQALADHLPRVAGRQVLGLSVLACLLLGGYSGLWAVL LATVLFFWLRQVMMRRLGGTTGDTAGAVLELLETAVLLGVALF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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