Pseudomonas protegens Pf-5, PFL_3284

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_3284
Name
Replicon chromosome
Genomic location 3792005 - 3792871 (- strand)

Cross-References

RefSeq YP_260389.2
GI 346643006
EC Number 3.4.21.-
Entrez 3477826
INSDC AAY92553.2
NCBI Locus Tag PFL_3284
UniParc UPI00021A003C
UniProtKB Acc Q4KBJ4
UniProtKB ID Q4KBJ4_PSEF5
UniRef100 UniRef100_Q4KBJ4
UniRef50 UniRef50_W6QZ77
UniRef90 UniRef90_Q4KBJ4

Product

Feature Type CDS
Coding Frame 1
Product Name
S54 family peptidase
Synonyms
Evidence for Translation
Charge (pH 7) 2.06
Kyte-Doolittle Hydrophobicity Value 0.525
Molecular Weight (kDa) 31838.2
Isoelectric Point (pI) 7.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 168 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002506 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_3284

Human Homologs

References

No references are associated with this feature.