Pseudomonas protegens Pf-5, PFL_3284

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01694	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0004252	serine-type endopeptidase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF01694	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.20.1540.10	-	IPR035952	Rhomboid-like superfamily	80	281	4.4E-39
SUPERFAMILY	SSF144091	Rhomboid-like	IPR035952	Rhomboid-like superfamily	84	286	1.2E-34
Gene3D	G3DSA:3.30.70.2080	-	IPR038244	Rhomboid protease, N-terminal domain superfamily	1	55	3.9E-25
Pfam	PF01694	Rhomboid family	IPR022764	Peptidase S54, rhomboid domain	137	279	7.3E-28
Pfam	PF16733	Rhomboid N-terminal domain	IPR031976	Rhomboid protease, N-terminal	1	66	3.9E-29
PANTHER	PTHR43066	RHOMBOID-RELATED PROTEIN	-	-	82	277	2.4E-20

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.