Pseudomonas protegens Pf-5, PFL_3194

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_3194
Name
Replicon	chromosome
Genomic location	3675716 - 3676906 (+ strand)

Cross-References

RefSeq	YP_260299.1
GI	70730558
Entrez	3478107
INSDC	AAY92463.1
NCBI Locus Tag	PFL_3194
UniParc	UPI000054D780
UniProtKB Acc	Q4KBT4
UniProtKB ID	Q4KBT4_PSEF5
UniRef100	UniRef100_Q4KBT4
UniRef50	UniRef50_Q4KBT4
UniRef90	UniRef90_Q4KBT4

Product

Feature Type	CDS
Coding Frame	1
Product Name	response regulator/EAL domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7)	-5.38
Kyte-Doolittle Hydrophobicity Value	0.069
Molecular Weight (kDa)	43.9
Isoelectric Point (pI)	6.23

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 501 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001731 (376 members)
Putative Inparalogs	1 predicted inparalogs hypothetical protein (PFL_3920) 59.3% identity

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_3194 Search term: response regulator/EAL domain-containing protein

Human Homologs

References