Pseudomonas protegens Pf-5, PFL_3194

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas protegens Pf-5 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CGAACCGCGGATCGACGGCGGCAGTTGGCAGATCAACACCAACAACCTGCGGGCGATCCATCAGGCCGTCAGCCAGGCCCAGGGGGTCTGGGTGGCCCAG AGCGAGGATCACTCCGATCACCGCGAGCTGAAAAAGCTCAGCCTGCATGTCCTGGTGGCCGAAGACAACGTGATCAACCAGTTGATCCTCAAGGACCAAC TGGAAGAACTGGGGTGCAGCGTGGAGCTGGCCTCGAACGGTGAAGAGGCCCTCTGCATCTGGAAGGCCGGTCGTTTCAACGTTGTGCTGACCGATGTGAA CATGCCGAAACTCAACGGTTATGAACTGGCCCAGGAGCTTCGGCGTCAAGGCTGTTCGATCCCCATCATCGGGGCAACGGCCAATGCAATGCGCGGAGAA GAAGAGCTCTGTCTTGCAGCCGGGATGAACCACTGCCTGGTGAAGCCCTTTGCATTAAGAGCGTTGTTCAACTATCTGGCGCCCTATGAAAGAGCCCCCC
DNA Sequence for Gene
>PFL_3194
ATGAAGTCCTGTAGCATTTTGATCGTCGAAGATCAGCCGTTTCAGTACATGTACCTGCAACACTTGTTCAACGAGCTGGGGCCCTACCAGCTGGAGGTGG CAAGCAGCGGCAAAGAAGCGCTGGAACGCCTCAAGCAGCGGCACTTCGACCTGGTACTGACAGACCTGCTGATGCCCGGCATGGATGGCGTGCAGTTCAT CCAGAGCCTGGCCACCCATCGCGTGCGCCCGGCCCTGGCGATCATGAGTGCGTCATCCCGGCGCATGCTGATGGGCGCCAGCCTGGTGGCCCGCAACCTA GGGCTGAAGGTCATCGGGTTGATTTCCAAACCCGTGAACCTGGCTGCACTGCGTGCACTCACCGCTCAGTTGCCAGGACTCGCCAATGACAGCAGCCCCC CACAGATCGGGGTCGAATGCAGCCCAGAGACCCTGCGTGAAGCCCTGCGCAACGGGCAGATCCAGGCCTGGTTCCAACCCAAGAAAGCCTTGAACAACGG TCGCATCGTCGCCGCCGAAGCCCTGGTGCGCTGGATCCACCCACAACACGGCATGCTCCTGCCTTGCGACTTCCTGCCGGCACTCACCGTGGCCCGCCTC GAAGAAGAACTACTGTGGCTGATCCTGGAGCAGGCCCTTGAGGCCCAGGTGCACTGGCGCGAAGACGGCTATGACATCCCGGTGTCCATCAACCTGCCGA CCCACCTGCTCAACAGCGCCGACCTGGCCGACCGCCTGTACGACTTCGTGATCCAGCACAACGGTGTGCCGGCCAGGATCTGCTTCGAACTCATGGAATG TTCGACCCCGGAGCACATCAGCAACTTCTACGCCGGAGCCTGCCGCCTGCGCATCAAGGGCTTCGGCCTGTCCCAGGACGACTTCGGCAAGGGCTACAGC TCCTACATGAACCTGGTATCGACACCCTTCACCGAATTGAAGATCGACCGGGGGCTGGTCCAGGGCTGTCACAACAATGAAGAAATAGCCCAGGCCCTGA CCTGCATCATCGCCCTGGGCCGGCAACTGGGCCTGACGGTCGTCGCCGAAGGCGTGGAAAGCGCCCACGAACTGGCTCTGTTGCGCAAGATCGACTGCAC CCAGGTGCAGGGCTTCCTGATTTCCCATGCGGTCTCCTCGCAACAGTTTCAGCAACTGCTGGCCCAAGACGGGCCGGCCACGGTGTATTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGATGAACCCATTGCCTGCCCGCGCAACAGTCACTCATCGCTGACGGTCCTGCCCCAGAGATAGGAATCTCGGCAGGGCCCTTATATGTGTTTGGGAAA TCAGTGATGAAAGAAAGCAGCACCTTGCTGCAGAACCTGGCTCGCAGCTTGCCCCGATTGAACATGGGCATACTGCTGGGCCTGGCGCTGCTGCTGTTCG CCACCCTGTACTGGACCCTCGAGCGTCTGTTCGATGAACAGAACAGCAACGTGCGCTTACATTTCGCCCAACTGATGGAGAACATCCAGGAGCAGGAGCT GTTTCTCAAACGCCTGGCCGCGCGCCATTCGATCGACGCCCTGAGCCTCGACGCCCCTCATCACCTGAACCTGCAAGCCTTCCCGCCCACCGCAGGCCAG CAATCCCCCTTCGCAACGCCCTTCAGCCTGAGCTTGTCCCCCCAGCAGCCAGCGGCCGGCGAGCTGCCCAGGGTGTTCGCCCTGGGGCTACAGCTGTCGA
Amino Acid Sequence
>response regulator/EAL domain-containing protein
MKSCSILIVEDQPFQYMYLQHLFNELGPYQLEVASSGKEALERLKQRHFDLVLTDLLMPGMDGVQFIQSLATHRVRPALAIMSASSRRMLMGASLVARNL GLKVIGLISKPVNLAALRALTAQLPGLANDSSPPQIGVECSPETLREALRNGQIQAWFQPKKALNNGRIVAAEALVRWIHPQHGMLLPCDFLPALTVARL EEELLWLILEQALEAQVHWREDGYDIPVSINLPTHLLNSADLADRLYDFVIQHNGVPARICFELMECSTPEHISNFYAGACRLRIKGFGLSQDDFGKGYS SYMNLVSTPFTELKIDRGLVQGCHNNEEIAQALTCIIALGRQLGLTVVAEGVESAHELALLRKIDCTQVQGFLISHAVSSQQFQQLLAQDGPATVY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site