Pseudomonas protegens Pf-5, PFL_2323 (scoA)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_2323
Name	scoA
Replicon	chromosome
Genomic location	2588268 - 2588966 (- strand)

Cross-References

RefSeq	YP_259430.1
GI	70729691
EC Number	2.8.3.5
Entrez	3476408
INSDC	AAY91596.1
NCBI Locus Tag	PFL_2323
UniParc	UPI000054D434
UniProtKB Acc	Q4KEA3
UniProtKB ID	Q4KEA3_PSEF5
UniRef100	UniRef100_Q4KEA3
UniRef50	UniRef50_P42315
UniRef90	UniRef90_Q4KEA3

Product

Feature Type	CDS
Coding Frame	1
Product Name	succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
Synonyms
Evidence for Translation
Charge (pH 7)	-6.37
Kyte-Doolittle Hydrophobicity Value	-0.085
Molecular Weight (kDa)	25.1
Isoelectric Point (pI)	4.89

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 286 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003436 (529 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_2323 Search term: scoA Search term: succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000196371 3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527] E-value: 2.5e-70 Percent Identity: 55.6

References