Pseudomonas protegens Pf-5, PFL_2323 (scoA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas protegens Pf-5 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GCGGGCCCGAAAGTGCTTGAGGATCGGCGGCAGCAGGTTGCCGGCAAAGGACGGCATCGCCGCCAGGGTCACCCGGCCTCGCTGCAGGCTGAAACGCTGG CGCAGTTCGTCCTCGGCGTTGTCCCAGTCGGCGATCAGACGCCGCGCCAGGGGCAGCAGGGCCTCGCCTTCCGGGGTCAGGGCCACATTGCGCGTATTGC GCGTGAACAGGCGCCCACCCAGGCCTTCCTCCAGCGCCTTGATCGTCAGGCTCAGGGCCGACTGCGACAGGTGCAGCCGTTCGCAGGCCAGGGCAAAGCT CAAACTGTGGGCCACGGCCAGAAATGCCCGTATCTGTTTAACCGTCATCTGCCATTCTCTTGGGTGTATGCCGCCCTGGATTATGCTGCTTTTCCAATCA ATCAACCTTAAAAATCAACTTAACAAATCAATCCCGCAGCGCAACACTGGCCCGCAAACGGCTGGCCAGCCGCCAACGAACAAGAAAGAGGAAGGTGCAA
DNA Sequence for Gene
>PFL_2323 |scoA
ATGGCAGGTTTCGACAAGCGCGTGGCGTCCTACGAGGAAGCCCTGGAAGGTCTGCAAGACGGCATGACCGTGATCGCCGGCGGCTTCGGCCTGTGCGGTA TCCCCGAAAACCTGATCGCCGAGATCAAGCGCCGCGGTACCCGCGACCTGACCGTGGTGTCCAACAACTGCGGGGTCGACGGTTTCGGCCTGGGCGTGCT CCTGGAAGACCGCCAGATCAGCAAGGTGATCGCCTCCTACGTGGGTGAAAACGCCCTGTTCGAGAAGCAGTTGCTCAGCGGCGAGATCGAAGTGGTACTG ACCCCCCAGGGCACCCTGGCGGAAAAAATGCGCGCCGGCGGCGCCGGGATCCCGGCCTTCTTCACCGCCACCGGCGTCGGCACCCCGGTGGCCGACGGCA AGGAAACCCGCGAATTCAAGGGCCGCACCTACCTGATGGAAGAGTCCATCACCGGTGACTTCGCCATCGTCAAGGGCTGGAAGGCCGACCACTTCGGCAA CGTGGTCTACCGCCACACCGCGCAGAACTTCAACCCCCTGGCGGCCACCGCCGGCAAGATCACCGTGGTCGAAGTGGAAGAAATCGTCGAACCGGGCGAG CTGGACCCGACGCAGATCCACACCCCCGGCATCTACGTCGACCGGGTCATCTGCGGCACCTTCGAGAAGCGCATCGAACAGCGCACCGTGCGCAAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGCCCTTCCCCAGCCCGACTAAAAGGACAACAAACATGGCTCTTACCCGCGAACAAATGGCTCAGCGCGTCGCCCGCGAACTGCAGGACGGCTTCTACG TCAACCTTGGCATCGGCATCCCGACCCTGGTGGCCAACTACATCCCCGACGGCATGGAAGTCATGCTGCAGTCGGAAAACGGCCTCCTGGGCATGGGCGC CTTCCCCACCGAGGACGAAGTCGACGCCGACATGATCAACGCCGGCAAACAGACGGTGACCGCGCGCATCGGCGCCTCGATCTTCTCGTCCGCCGAATCC TTCGCGATGATCCGCGGCGGCCATATCGACCTGACCGTGCTCGGCGCCTTCGAAGTGGACGTGCAGGGCAACATCGCCTCCTGGATGATCCCCGGCAAGC TGGTCAAGGGCATGGGCGGCGCCATGGATCTGGTGGCCGGTGCCGAGAACATCATCGTCACCATGACCCACGCCTCGAAAGACGGCGAATCCAAATTGCT
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A
MAGFDKRVASYEEALEGLQDGMTVIAGGFGLCGIPENLIAEIKRRGTRDLTVVSNNCGVDGFGLGVLLEDRQISKVIASYVGENALFEKQLLSGEIEVVL TPQGTLAEKMRAGGAGIPAFFTATGVGTPVADGKETREFKGRTYLMEESITGDFAIVKGWKADHFGNVVYRHTAQNFNPLAATAGKITVVEVEEIVEPGE LDPTQIHTPGIYVDRVICGTFEKRIEQRTVRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site