Pseudomonas protegens Pf-5, PFL_2216 (pedE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_2216
Name
pedE
Replicon chromosome
Genomic location 2474931 - 2476826 (- strand)

Cross-References

RefSeq YP_259323.1
GI 70729585
EC Number 1.1.2.8
Entrez 3478832
INSDC AAY91490.1
NCBI Locus Tag PFL_2216
UniParc UPI000054D3C9
UniProtKB Acc Q4KEL0
UniProtKB ID Q4KEL0_PSEF5
UniRef100 UniRef100_Q4KEL0
UniRef50 UniRef50_A8R3S4
UniRef90 UniRef90_A8R3S4

Product

Feature Type CDS
Coding Frame 1
Product Name
quinoprotein ethanol dehydrogenase PedE
Synonyms
Evidence for Translation
Charge (pH 7) 0.08
Kyte-Doolittle Hydrophobicity Value -0.469
Molecular Weight (kDa) 68980.1
Isoelectric Point (pI) 7.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 167 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003450 (426 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_2216
Search term: pedE

Human Homologs

References

No references are associated with this feature.