Pseudomonas protegens Pf-5, PFL_1921 (ccoN_1)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_1921
Name	ccoN_1
Replicon	chromosome
Genomic location	2141394 - 2142836 (- strand)

Cross-References

RefSeq	YP_259040.1
GI	70729303
EC Number	1.9.3.1
Entrez	3477612
INSDC	AAY91208.1
NCBI Locus Tag	PFL_1921
UniParc	UPI000054D2B5
UniProtKB Acc	Q4KFE3
UniProtKB ID	Q4KFE3_PSEF5
UniRef100	UniRef100_Q4KFE3
UniRef50	UniRef50_Q9I3G0
UniRef90	UniRef90_Q4KFE3

Product

Feature Type	CDS
Coding Frame	1
Product Name	cbb3-type cytochrome c oxidase subunit I
Synonyms
Evidence for Translation
Charge (pH 7)	13.24
Kyte-Doolittle Hydrophobicity Value	0.568
Molecular Weight (kDa)	53.4
Isoelectric Point (pI)	9.59

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 277 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001566 (1638 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_1921 Search term: ccoN_1 Search term: cbb3-type cytochrome c oxidase subunit I

Human Homologs

References