Pseudomonas protegens Pf-5, PFL_1921 (ccoN_1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas protegens Pf-5 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
AAGACGAGTCACGGCAAGCTGCGGGTTCCCGACTTGCAGCTTGCCGCTCGTGGTTCAACCTCCCGCTCCTTTGCGACCAAGTGTCGCACCCTCTCCCGCA GCGCGTTTGCACTCATCTGATTCAGGTCTAAGCTTGCCCCGATGGGGACTGGCACGGGCTGGTCACAGGCCAACGGTATCCGTGACGTTCGAAGCTTCTG CTCGATGACAGGCCGCAAAGGCTGGTTTATACCGGCTGTCGACTCTCTTACCGCCTGTCAGCTGATCCATCAGCTTCCACACACCCGGTTACAACCGACC TGACACCCCCCGTTTCCTGTCCATGGCGACAGCTTGTCCGAGGGCAATTTTTTGTCCCTACTCGGCATAGGGAAAGGCCGCAGAATCAGGCATGGAACGC ATTGACCCAGGTCATAGCGCGTTGCAATGACCCCCTGCTTTCTCCATACTTGCGACCGATTTTTATCCCTAATAAAACACCCAAACCGTGGAACCTTAGA
DNA Sequence for Gene
>PFL_1921 |ccoN_1
ATGAGCACAGCAATCAGTCCGACTGCTTATAACTATAAGGTAGTCCGCCAGTTCGCCATCATGACGGTGGTCTGGGGGATCCTTGGCATGGGGCTCGGTG TCTTCATCGCCTCACAACTGGTATGGCCGGAGTTGAACTTCGGTCTGCCGTGGACGACGTTTGGACGCCTGCGCCCGCTGCACACCAACCTGGTGATCTT CGCCTTCGGTGGATGTGCATTGTTTGCCACCTCTTACTATGTCGTGCAGCGAACCTGCCAGACGCGACTGATTTCCGACAGCCTCGCGGCCTTCACCTTC TGGGGTTGGCAAGCGGTGATCGTCGGCGCGATCGTGACCCTGCCACTGGGTTACACCACCACCAAGGAATACGCCGAACTGGAATGGCCCCTGGCTATCC TGCTGGCGATCGTCTGGGTCACCTACGGCCTGGTATTCTTCGGCACCATCACCAAGCGCAAGACCAAGCACATCTATGTGGGCAACTGGTTCTACGGTGC CTTCATCGTGGTGACCGCGATGCTGCACATCGTCAACCACGCTTCCCTGCCGGTCAGCTTCTTCAAGTCCTACTCGGCCTACGCCGGTGCGACTGATGCG ATGATCCAGTGGTGGTACGGCCACAACGCCGTGGGCTTCTTCCTGACCACCGGCTTCCTGGGGATGATGTACTACTTCGTACCCAAGCAGGCCGAGCGTC CGATCTATTCCTATCGCCTGTCCATCGTGCACTTCTGGGCGCTGATCACCCTGTACATCTGGGCCGGTCCGCACCACCTGCACTACACCGCGCTGCCGGA CTGGGCCCAGTCCCTGGGCATGGCCATGTCGATCATCCTGCTGGCGCCAAGCTGGGGCGGCATGATCAACGGCATGATGACCCTCTCGGGCGCCTGGCAT AAGCTGCGCACCGACCCGATCCTGCGCTTTTTGGTGGTATCCCTGGCGTTCTACGGCATGTCGACCTTCGAAGGTCCGATGATGGCGATCAAGACCGTCA ACTCGCTCTCGCACTACACCGACTGGACCATCGGCCACGTACACGCCGGCGCTCTGGGCTGGGTAGCGATGATCTCCATCGGCGCCCTGTACCACCTGAT CCCGAAAGTCTTCGGTCGTCAGCAGATGCACAGCATCGGCCTGATCAACACCCACTTCTGGCTGGCTACCATCGGTACCGTGCTCTACATCGCCTCGATG TGGGTCAACGGCATCACCCAGGGCCTGATGTGGCGTGCAATCAACGATGACGGCACCCTCACCTACTCCTTCGTCGAAGCGCTGCAAGCCAGCCACCCGG GCTTTATCGTCCGTGCTCTGGGCGGTGCGTTCTTCGCCACCGGCATGCTGATCATGGCGTACAACGTGTTCCGTACCGTTCGCGCCTCGAACCCGGCTGA AGCTGAAGCCGCTGCTCAGATCGCTGTAGTTGGAGCTCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGAAGCACGAAGTAGTCGAGAAGAATATTGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTCAGCATCGGCGGCCTGACCCAGATCGTCCCGCTGTTCTT CCAGGACGTCACCAACAAGCCGGTGGAAGGCATGAAGCCGCGTACCGCGCTGGAACTGGAAGGCCGCGATGTCTACATCGCCAACGGCTGTGTCGGCTGC CACTCGCAGATGATCCGTCCGTTCCGCGCTGAAACCGAACGCTATGGTCACTACTCGGTGGCTGGTGAGAGCGTCTGGGACCACCCGTTCCTGTGGGGTT CCAAGCGTACCGGCCCGGACCTGGCCCGAGTGGGCGGTCGTTACTCCGATGACTGGCAGCGTGCGCACTTGTACAACCCGCGCAACGTGGTGCCCGAGTC GAAGATGCCGGCTTATCCGTTCCTCGTAGAAAACAAGCTCGACGGCAAAGACACCGCGAAGAAAATGGAAGTCTTGCGCACGCTCGGCGTCCCTTACACC
Amino Acid Sequence
>cbb3-type cytochrome c oxidase subunit I
MSTAISPTAYNYKVVRQFAIMTVVWGILGMGLGVFIASQLVWPELNFGLPWTTFGRLRPLHTNLVIFAFGGCALFATSYYVVQRTCQTRLISDSLAAFTF WGWQAVIVGAIVTLPLGYTTTKEYAELEWPLAILLAIVWVTYGLVFFGTITKRKTKHIYVGNWFYGAFIVVTAMLHIVNHASLPVSFFKSYSAYAGATDA MIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIVHFWALITLYIWAGPHHLHYTALPDWAQSLGMAMSIILLAPSWGGMINGMMTLSGAWH KLRTDPILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGALYHLIPKVFGRQQMHSIGLINTHFWLATIGTVLYIASM WVNGITQGLMWRAINDDGTLTYSFVEALQASHPGFIVRALGGAFFATGMLIMAYNVFRTVRASNPAEAEAAAQIAVVGAH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site