Pseudomonas protegens Pf-5, PFL_1653 (fliR)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_1653
Name	fliR
Replicon	chromosome
Genomic location	1853782 - 1854564 (+ strand)

Cross-References

RefSeq	YP_258779.2
GI	346642822
Entrez	3477588
INSDC	AAY90950.2
NCBI Locus Tag	PFL_1653
UniParc	UPI000219FE7F
UniProtKB Acc	Q4KG54
UniProtKB ID	Q4KG54_PSEF5
UniRef100	UniRef100_Q4KG54
UniRef50	UniRef50_Q4KG54
UniRef90	UniRef90_Q4KG54

Product

Feature Type	CDS
Coding Frame	1
Product Name	flagellar biosynthesis protein FliR
Synonyms
Evidence for Translation
Charge (pH 7)	-1.29
Kyte-Doolittle Hydrophobicity Value	1.135
Molecular Weight (kDa)	28.0
Isoelectric Point (pI)	6.24

Subcellular localization

Individual Mappings	Localization Confidence PMID Flagellar Note: This is based on PSORTb V3.0 secondary localization prediction Class 3 20472543 Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 321 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001365 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_1653 Search term: fliR Search term: flagellar biosynthesis protein FliR

Human Homologs

References