Pseudomonas protegens Pf-5, PFL_1413

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1413
Name
Replicon chromosome
Genomic location 1592059 - 1592979 (+ strand)

Cross-References

RefSeq YP_258542.2
GI 346642793
Entrez 3478955
INSDC AAY90698.2
NCBI Locus Tag PFL_1413
UniParc UPI000219FEFA
UniProtKB Acc Q4KGU1
UniProtKB ID Q4KGU1_PSEF5
UniRef100 UniRef100_Q4KGU1
UniRef50 UniRef50_Q394V7
UniRef90 UniRef90_Q4KGU1

Product

Feature Type CDS
Coding Frame 1
Product Name
dihydrodipicolinate synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -3.18
Kyte-Doolittle Hydrophobicity Value 0.142
Molecular Weight (kDa) 32972.7
Isoelectric Point (pI) 5.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 629 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000222 (1144 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1413

Human Homologs

References

No references are associated with this feature.