Pseudomonas protegens Pf-5, PFL_1413

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016829	lyase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00146	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pfl00330	Arginine and proline metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00146	Dihydrodipicolinate synthase signature	IPR002220	DapA-like	41	62	2.5E-10
PRINTS	PR00146	Dihydrodipicolinate synthase signature	IPR002220	DapA-like	134	151	2.5E-10
Pfam	PF00701	Dihydrodipicolinate synthetase family	IPR002220	DapA-like	9	293	5.1E-58
CDD	cd00408	DHDPS-like	-	-	11	291	1.53898E-96
PRINTS	PR00146	Dihydrodipicolinate synthase signature	IPR002220	DapA-like	77	95	2.5E-10
PANTHER	PTHR12128	DIHYDRODIPICOLINATE SYNTHASE	IPR002220	DapA-like	5	294	2.4E-52
SUPERFAMILY	SSF51569	Aldolase	-	-	7	293	4.81E-82
Gene3D	G3DSA:3.20.20.70	Aldolase class I	IPR013785	Aldolase-type TIM barrel	5	296	3.5E-81
PIRSF	PIRSF001365	DHDPS	IPR002220	DapA-like	3	302	1.1E-73
SMART	SM01130	DHDPS_2	IPR002220	DapA-like	7	295	1.4E-87

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.