Pseudomonas protegens Pf-5, PFL_0446 (pilN)

Gene Feature Overview

Strain	Pseudomonas protegens Pf-5 GCF_000012265.1|latest
Locus Tag	PFL_0446
Name	pilN
Replicon	chromosome
Genomic location	512752 - 513318 (+ strand)

Cross-References

RefSeq	YP_257590.1
GI	70733950
Entrez	3481037
INSDC	AAY95855.1
NCBI Locus Tag	PFL_0446
UniParc	UPI000054CD13
UniProtKB Acc	Q4KJJ3
UniProtKB ID	Q4KJJ3_PSEF5
UniRef100	UniRef100_Q4KJJ3
UniRef50	UniRef50_G3XD30
UniRef90	UniRef90_Q4KJJ3

Product

Feature Type	CDS
Coding Frame	1
Product Name	type IV pilus biogenesis protein PilN
Synonyms
Evidence for Translation
Charge (pH 7)	4.23
Kyte-Doolittle Hydrophobicity Value	-0.270
Molecular Weight (kDa)	20979.8
Isoelectric Point (pI)	10.50

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 99 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004646 (485 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFL_0446 Search term: pilN Search term: type IV pilus biogenesis protein PilN

Human Homologs

References