Pseudomonas protegens Pf-5, PFL_0248

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_0248
Name
Replicon chromosome
Genomic location 287205 - 288002 (- strand)

Cross-References

RefSeq YP_257394.1
GI 70733754
Entrez 3480841
INSDC AAY95659.1
NCBI Locus Tag PFL_0248
UniParc UPI000054CC4F
UniProtKB Acc Q4KK39
UniProtKB ID Q4KK39_PSEF5
UniRef100 UniRef100_Q4KK39
UniRef50 UniRef50_P0AEN0
UniRef90 UniRef90_Q4KK39

Product

Feature Type CDS
Coding Frame 1
Product Name
cystine transporter subunit
Synonyms
Evidence for Translation
Charge (pH 7) 1.24
Kyte-Doolittle Hydrophobicity Value -0.250
Molecular Weight (kDa) 29.0
Isoelectric Point (pI) 8.66

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 488 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001211 (994 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_0248

Human Homologs

References

No references are associated with this feature.