Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5127

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5127
Name
Replicon chromosome
Genomic location 6197605 - 6198648 (- strand)

Cross-References

RefSeq YP_004356582.1
GI 330812120
Entrez 10474352
INSDC AEA71578.1
NCBI Locus Tag PSEBR_a5127
UniParc UPI0002040ECA
UniProtKB Acc F2KM35
UniProtKB ID F2KM35_PSEBN
UniRef100 UniRef100_A0A0D0R4P4
UniRef50 UniRef50_I3UHC8
UniRef90 UniRef90_G8Q0A9

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter substrate-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.06
Kyte-Doolittle Hydrophobicity Value -0.263
Molecular Weight (kDa) 37.9
Isoelectric Point (pI) 5.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 121 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000587 (511 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5127

Human Homologs

References

No references are associated with this feature.