Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a5050

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas brassicacearum subsp. brassicacearum NFM421
GCF_000194805.1|latest
Locus Tag
PSEBR_a5050
Name
Replicon chromosome
Genomic location 6100840 - 6101538 (+ strand)

Cross-References

RefSeq YP_004356486.1
GI 330812024
Entrez 10474247
INSDC AEA71482.1
NCBI Locus Tag PSEBR_a5050
UniParc UPI0002040BBF
UniProtKB Acc F2KLT9
UniProtKB ID F2KLT9_PSEBN
UniRef100 UniRef100_A0A0D0STP0
UniRef50 UniRef50_G8PZ49
UniRef90 UniRef90_G8PZ49

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane protein W
Synonyms
Evidence for Translation
Charge (pH 7) -4.09
Kyte-Doolittle Hydrophobicity Value 0.106
Molecular Weight (kDa) 24.5
Isoelectric Point (pI) 5.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 149 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001618 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSEBR_a5050

Human Homologs

References

No references are associated with this feature.