Pseudomonas fulva 12-X, Psefu_3580

Gene Feature Overview

Strain	Pseudomonas fulva 12-X GCF_000213805.1|latest
Locus Tag	Psefu_3580
Name
Replicon	chromosome
Genomic location	3853184 - 3855289 (- strand)

Cross-References

RefSeq	YP_004475636.1
GI	333901763
EC Number	2.7.7.8
Entrez	10656756
INSDC	AEF23542.1
NCBI Locus Tag	Psefu_3580
UniParc	UPI00020CC850
UniProtKB Acc	F6AE30
UniProtKB ID	F6AE30_PSEF1
UniRef100	UniRef100_F6AE30
UniRef50	UniRef50_P41121
UniRef90	UniRef90_A4XYD6

Product

Feature Type	CDS
Coding Frame	1
Product Name	polyribonucleotide nucleotidyltransferase
Synonyms
Evidence for Translation
Charge (pH 7)	-18.14
Kyte-Doolittle Hydrophobicity Value	-0.059
Molecular Weight (kDa)	75.1
Isoelectric Point (pI)	4.87

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 662 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004385 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psefu_3580 Search term: polyribonucleotide nucleotidyltransferase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000400646 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166] E-value: 1.5e-110 Percent Identity: 35.3
Ensembl 110, assembly GRCh38.p14	ENSP00000393953 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166] E-value: 1.5e-110 Percent Identity: 35.3

References