Pseudomonas fulva 12-X, Psefu_3580
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fulva 12-X chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGATCGGTCGTCTGGGTCTGCGTCGCTAAGCAATGCTTGGTCGTCGTTGACTGCAAAAGCTGGAAGTGGGCTCGCCCCGCTTCCAGCTTTTGCTTTTAGG GTGTATTCACGTTTCAGCACTGCCGCGCCGGAGCCAGTTTTGCCGCGAGGTAAGGCACGAGTCGCGAAGTTTGGCTGGCCAAATGAGCCGACGAGAAACG CAGCATCGCGGCAAAACTGGCCCGGCCCTGCGGGTTGCGCGGAAAATCTCGCCATGCGTCGTTGGCGGGCTTGGCAAGGGAATACCATTCCCGGCGCCCA CCGCCTCGCTTGGCGAGATTTTGCGCAGCAACGCGGCTTGTGCTGAAACGTGAACACACCCTACGCTCTACCCGTTTTTTGCAAGATCGAAGCCCTTTGA TGCTTCACCTCTGGACAGCGCCGGGCCGACTCCCGCAGCGATTGCCCACCAATTCGCAAGAACCGTTTCCCCCAAAGGCAACAAAGAGAAGGAAAACACC
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| DNA Sequence for Gene |
>Psefu_3580
GTGAACCCGGTAATCAAGAAATTTCAATTTGGTCAGTCGACCGTCACCCTCGAGACTGGCCGTATCGCCCGTCAGGCTTCCGGCGCTGTGCTGGTCACCG TCGACAACGACGTGACCGTGCTGGTCACCGTGGTAGGCGCCAAGTCCGCCGACCCGAGCAAGGGCTTCTTCCCGCTGTCCGTGCACTATCAGGAAAAGAC TTACGCAGCGGGCAAGATCCCAGGCGGCTTCTTCAAGCGTGAAGCACGCCCGAGCGAGAAGGAAACCCTGACCTCGCGCCTGATCGATCGTCCGATCCGC CCGCTGTTCCCGGAAGGCTTCCAGAACGAAGTGCAGGTCATCTGCACCGTGGTCTCCACTAGCAAGAAGACCGATCCGGACATCGCAGCGATGATCGGTA CCTCCGCTGCCCTGGCCATCTCCGGCATCCCGTTCGACGGCCCCATCGGTGCCGCCCGTGTTGCCTACCACCCGGAAACCGGCTATCTGCTGAACCCGAA CTACGAGCAGCTCAAGGCCTCGAGCCTGGACATGGTCGTGGCCGGTACCAAAGACGCCGTGCTGATGGTCGAATCCGAAGCCAAAGAGCTGACCGAAGAC CAGATGCTGGGCGCTGTGCTGTTCGCCCATGACGAATTCCAGGCCGTCATCCAGGCCGTTACCGAACTGGCCGCCGAAGCCGGCAAGCCGCGTTGGGACT GGCAGGCCGCTGCCGCCAACACCAGCCTGCTGGACGCCATCCGCGCCGAGTTCGGTGCTGCGATCTCCGACGCCTACACCATCATCATCAAGCAGGATCG CTATGCGCGCCTGGGCGAGCTGCGCGACCAGGTGGTTGCCAAGTTCTCCGGTGAGGAAGGTCAGCCGAGCGCTGGCGAAGTCAAAGACGCCTTCGGCGAA ATCGAATACCGCACCGTGCGCGAGAACATCGTCAACGGCAAGCCGCGTATCGATGGTCGTGACACCCGTACCGTACGTGGCCTGAACATCGAGGTCGGCG TGCTGGACAAGACCCACGGTTCGGCCCTGTTCACCCGTGGCGAAACCCAGGCGCTGGTCGTGGCCACCCTCGGTACCGCCCGCGACGCACAGCTGCTCGA CACCCTCGAAGGCGAGAAGAAAGACCCCTTCATGCTGCACTACAACTTCCCGCCGTACTCGGTGGGCGAGTGTGGTCGCATGGGCGCCACCGGTCGTCGC GAGATCGGCCACGGCCGCCTCGCTCGTCGTGGCGTTGCCGCCATGCTGCCGAGCGCTGACGAGTTCCCGTACACCATCCGTATCGTCTCGGAGATCACCG AGTCCAACGGTTCGTCCTCCATGGCTTCGGTTTGCGGCGCTTCCCTGGCCCTGATGGACGCCGGTGTGCCGATGAAGGCGCCGGTTGCCGGTATCGCCAT GGGTCTGGTCAAGGAAGGCGAGAAGTTCGCCGTGCTGACCGACATCCTCGGTGACGAAGACCACCTGGGCGACATGGACTTCAAGGTGGCCGGTACCGCC AATGGCGTCACCGCGCTGCAGATGGACATCAAGATCCAGGGCATCACCGAAGAGATCATGGAGATCGCCCTGAATCAGGCCCTGGAAGCGCGCCTGAACA TCCTCGGCCAGATGAACCAGGTGATCGCCCAGTCGCGCAGCGAGCTGTCGGCCAACGCCCCGACCATGCTGGCGATGAAGATCGATCAGGACAAGATCCG TGACGTCATCGGCAAGGGCGGCGCCACCATCCGCGCCATCTGCGAAGAAACCAAGGCCTCGATCGACATTGAAGACGACGGCTCGATCAAGATCTTCGGC GAAACCAAGGAAGCCGCCGACGCTGCCAAGCAGCGCGTACTAGCGATCACCGCCGAGGCCGAGATCGGCAAGATCTATGTCGGCAAGGTCGAGCGTATCG TTGACTTCGGCGCCTTCGTCAACATCCTGCCGGGCAAGGACGGTCTGGTGCACATCTCCATGCTCAGCGATGCGCGCGTAGAGAAGGTCACCGACATCCT CAAGGAAGGCCAGGAAGTGGAAGTACTGGTACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCCATCAAGGACGTCGCCGCTGCCAAAGCCTCGGGT GTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCGGGCTGAAGCCGCATAACGAGAAAGCCAGTCAGGGCGACCTGACTGGCTTTTTTATTGCCCGTCGTCTGGTTGGCGGGTGAACGGTGATGTTGCATC GCAGTAACGCCAGGCCCTGCTAGATTAGGGGCAGGCGCGATATTTCCGCTCTGCTAACCGTCAGGCATAAAAAAACGCCAGCCAGGCGCGGCCTGGCTGG CGTTTTCATTGGCGCGTGGCGGTCAGTCGGTGTACTGGAACAGCTTGATGACTTTCTGTACGCCAGAGGTGCTCTGCACCACGTTGCTGGCTGCGTTGGC TTCCTGGCGGCTGACCACGCCGAGCAGGTAGACGATGCCGTTCTCGGTGATCACCTTGATGCGGCTACCCGGCACGCCGCTGTCGGCGAGCATCTGGGTC TTGATCTTGGTGGTCAGCAGCGAGTCGTTGCTGCGTGCCAGGAGCGAACTGGGCTGCTGCACCTGCAGCTCGTTGTGTACCTTGCGTACGCCCTGAACGC
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| Amino Acid Sequence |
>polyribonucleotide nucleotidyltransferase
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDNDVTVLVTVVGAKSADPSKGFFPLSVHYQEKTYAAGKIPGGFFKREARPSEKETLTSRLIDRPIR PLFPEGFQNEVQVICTVVSTSKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAYHPETGYLLNPNYEQLKASSLDMVVAGTKDAVLMVESEAKELTED QMLGAVLFAHDEFQAVIQAVTELAAEAGKPRWDWQAAAANTSLLDAIRAEFGAAISDAYTIIIKQDRYARLGELRDQVVAKFSGEEGQPSAGEVKDAFGE IEYRTVRENIVNGKPRIDGRDTRTVRGLNIEVGVLDKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGEKKDPFMLHYNFPPYSVGECGRMGATGRR EIGHGRLARRGVAAMLPSADEFPYTIRIVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLTDILGDEDHLGDMDFKVAGTA NGVTALQMDIKIQGITEEIMEIALNQALEARLNILGQMNQVIAQSRSELSANAPTMLAMKIDQDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG ETKEAADAAKQRVLAITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARVEKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASG V
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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