Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_B0045
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest |
| Locus Tag |
PSPPH_B0045
|
| Name |
|
| Replicon | small plasmid |
| Genomic location | 38451 - 39017 (+ strand) |
Cross-References
| RefSeq | YP_272300.1 |
| GI | 71725314 |
| Entrez | 3555452 |
| NCBI Locus Tag | PSPPH_B0045 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
single-stranded DNA-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -0.32 |
| Kyte-Doolittle Hydrophobicity Value | -0.905 |
| Molecular Weight (kDa) | 21089.4 |
| Isoelectric Point (pI) | 6.80 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 583 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG021085 (3 members) |
| Putative Inparalogs |
1 predicted inparalogs single-stranded DNA-binding protein (PSPPH_4537) 85.6% identity |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PSPPH_B0045
Search term: single-stranded DNA-binding protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
single stranded DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11317]
E-value:
4.8e-16
Percent Identity:
38.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
single stranded DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11317]
E-value:
4.8e-16
Percent Identity:
38.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
single stranded DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11317]
E-value:
4.8e-16
Percent Identity:
38.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
single stranded DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11317]
E-value:
4.8e-16
Percent Identity:
38.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
single stranded DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11317]
E-value:
4.8e-16
Percent Identity:
38.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
single stranded DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11317]
E-value:
4.8e-16
Percent Identity:
38.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
single stranded DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11317]
E-value:
4.8e-16
Percent Identity:
38.2
|
References
No references are associated with this feature.