Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4866

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_4866
Name
Replicon chromosome
Genomic location 5533135 - 5534511 (+ strand)

Cross-References

RefSeq YP_276959.1
GI 71734464
Entrez 3556772
INSDC AAZ34228.1
NCBI Locus Tag PSPPH_4866
UniParc UPI0000576102
UniProtKB Acc Q48CD4
UniProtKB ID Q48CD4_PSE14
UniRef100 UniRef100_Q48CD4
UniRef50 UniRef50_B2GIW1
UniRef90 UniRef90_S3MLV8

Product

Feature Type CDS
Coding Frame 1
Product Name
permease
Synonyms
Evidence for Translation
Charge (pH 7) 6.33
Kyte-Doolittle Hydrophobicity Value 0.888
Molecular Weight (kDa) 49.3
Isoelectric Point (pI) 9.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 427 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000219 (3043 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_4866
Search term: permease

Human Homologs

Ensembl 110, assembly GRCh38.p14
solute carrier family 7 member 1 [Source:HGNC Symbol;Acc:HGNC:11057]
E-value: 7.9e-12
Percent Identity: 26.4

References

No references are associated with this feature.